So what's the solution, build a wheel with the version of numpy that we use, this can be done if you have the python compiler for windows.
We use Python 2.7 for which you can find the installer here
virtualenv pandas
cd pandas\scripts
activate
cd ../..
pip install numpy==1.9.3+mkl --no-index --find-links=z:\PythonWheels
cd Source
python setup.py build_ext --inplace --force
python setup.py bdist_wheel
Voila, one wheel built with numpy==1.9.3+mkl, this can then be installed by pip on various environments.